USING WHOLE EXOME SEQUENCING TO PRELIMINARY ASSESSMENT OF GENETIC VARIATIONS IN PATIENTS WITH CONGENITAL HEART VALVE DEFECTS

Authors

  • Nguyễn Hoàng Thanh Trang, Nguyễn Thị Kim Liên, Nguyễn Văn Tụng, Nguyễn Huy Hoàng, Trần Đắc Đại

Keywords:

Bioinformatics, genetic variant, next generation sequencing, valvular heart disease, whole exome sequencing, bioinformatics

Abstract

Congenital valvular heart valve defects are characterized by abnormality of the heart valves, such as any valve in the heart that has damage or missing. There are several causes of this disease such as infections, degenerative conditions and genetic variants. Whole exome sequencing (WES) allows simultaneous analysis of variants of multiple or even all

genes, thereby reducing the time needed to diagnose for patients. Therefore, WES has been considered as an effective tool for the detection of novel causal genes in the study of genetics of the heart valve defects. In this study, by applying whole exome sequencing in 01 patient with congenital heart valve defects, we detected 82,556 missense and 11.334 indel including variants were reported in the database of single nucleotide polymorphisms (dbSNP) and novel variants. The result of this study shows potential of WES in genetic research, particularly in the identification of inherited genetic disorders.

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